knitr::opts_chunk$set(
  warning = TRUE, # show warnings during codebook generation
  message = TRUE, # show messages during codebook generation
  error = TRUE, # do not interrupt codebook generation in case of errors,
                # usually better for debugging
  echo = TRUE  # show R code
)
ggplot2::theme_set(ggplot2::theme_bw())
pander::panderOptions("table.split.table", Inf)

We collected the following data.

# omit the following lines, if your missing values are already properly labelled
codebook_data <- detect_missing(codebook_data,
    only_labelled = TRUE, # only labelled values are autodetected as
                                   # missing
    negative_values_are_missing = FALSE, # negative values are missing values
    ninety_nine_problems = TRUE,   # 99/999 are missing values, if they
                                   # are more than 5 MAD from the median
    )

# If you are not using formr, the codebook package needs to guess which items
# form a scale. The following line finds item aggregates with names like this:
# scale = scale_1 + scale_2R + scale_3R
# identifying these aggregates allows the codebook function to
# automatically compute reliabilities.
# However, it will not reverse items automatically.
codebook_data <- detect_scales(codebook_data)


# Does your dataset have a name that is not reflected in the file name?
# Uncomment the line below and change the name
# metadata(codebook_data)$name <- "My Awesome Dataset"

codebook(codebook_data)
## No missing values.
knitr::asis_output(data_info)

Metadata

Description

if (exists("name", meta)) {
  glue::glue(
    "__Dataset name__: {name}",
    .envir = meta)
}

Dataset name: tidydata.txt

cat(description)

The dataset has N=180 rows and 88 columns. 180 rows have no missing values on any column.

Metadata for search engines

  • Date published: 2020-05-31
meta <- meta[setdiff(names(meta),
                     c("creator", "datePublished", "identifier",
                       "url", "citation", "spatialCoverage", 
                       "temporalCoverage", "description", "name"))]
pander::pander(meta)
  • keywords: subject_id, activity, tBodyAcc-mean()-X, tBodyAcc-mean()-Y, tBodyAcc-mean()-Z, tBodyAcc-std()-X, tBodyAcc-std()-Y, tBodyAcc-std()-Z, tGravityAcc-mean()-X, tGravityAcc-mean()-Y, tGravityAcc-mean()-Z, tGravityAcc-std()-X, tGravityAcc-std()-Y, tGravityAcc-std()-Z, tBodyAccJerk-mean()-X, tBodyAccJerk-mean()-Y, tBodyAccJerk-mean()-Z, tBodyAccJerk-std()-X, tBodyAccJerk-std()-Y, tBodyAccJerk-std()-Z, tBodyGyro-mean()-X, tBodyGyro-mean()-Y, tBodyGyro-mean()-Z, tBodyGyro-std()-X, tBodyGyro-std()-Y, tBodyGyro-std()-Z, tBodyGyroJerk-mean()-X, tBodyGyroJerk-mean()-Y, tBodyGyroJerk-mean()-Z, tBodyGyroJerk-std()-X, tBodyGyroJerk-std()-Y, tBodyGyroJerk-std()-Z, tBodyAccMag-mean(), tBodyAccMag-std(), tGravityAccMag-mean(), tGravityAccMag-std(), tBodyAccJerkMag-mean(), tBodyAccJerkMag-std(), tBodyGyroMag-mean(), tBodyGyroMag-std(), tBodyGyroJerkMag-mean(), tBodyGyroJerkMag-std(), fBodyAcc-mean()-X, fBodyAcc-mean()-Y, fBodyAcc-mean()-Z, fBodyAcc-std()-X, fBodyAcc-std()-Y, fBodyAcc-std()-Z, fBodyAcc-meanFreq()-X, fBodyAcc-meanFreq()-Y, fBodyAcc-meanFreq()-Z, fBodyAccJerk-mean()-X, fBodyAccJerk-mean()-Y, fBodyAccJerk-mean()-Z, fBodyAccJerk-std()-X, fBodyAccJerk-std()-Y, fBodyAccJerk-std()-Z, fBodyAccJerk-meanFreq()-X, fBodyAccJerk-meanFreq()-Y, fBodyAccJerk-meanFreq()-Z, fBodyGyro-mean()-X, fBodyGyro-mean()-Y, fBodyGyro-mean()-Z, fBodyGyro-std()-X, fBodyGyro-std()-Y, fBodyGyro-std()-Z, fBodyGyro-meanFreq()-X, fBodyGyro-meanFreq()-Y, fBodyGyro-meanFreq()-Z, fBodyAccMag-mean(), fBodyAccMag-std(), fBodyAccMag-meanFreq(), fBodyBodyAccJerkMag-mean(), fBodyBodyAccJerkMag-std(), fBodyBodyAccJerkMag-meanFreq(), fBodyBodyGyroMag-mean(), fBodyBodyGyroMag-std(), fBodyBodyGyroMag-meanFreq(), fBodyBodyGyroJerkMag-mean(), fBodyBodyGyroJerkMag-std(), fBodyBodyGyroJerkMag-meanFreq(), angle(tBodyAccMean,gravity), angle(tBodyAccJerkMean),gravityMean), angle(tBodyGyroMean,gravityMean), angle(tBodyGyroJerkMean,gravityMean), angle(X,gravityMean), angle(Y,gravityMean) and angle(Z,gravityMean)

knitr::asis_output(survey_overview)

Variables

if (detailed_variables || detailed_scales) {
  knitr::asis_output(paste0(scales_items, sep = "\n\n\n", collapse = "\n\n\n"))
}

subject_id

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
subject_id integer 0 180 180 15.5 8.68 1 8 15.5 23 30 ▇▇▆▇▇▆▇▇
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

activity

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n empty n_unique min max
activity character 0 180 180 0 6 6 18
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-mean()-X numeric 0 180 180 0.27 0.012 0.22 0.27 0.28 0.28 0.3 ▁▁▁▁▂▇▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-mean()-Y numeric 0 180 180 -0.018 0.0058 -0.041 -0.02 -0.017 -0.015 -0.0013 ▁▁▂▂▇▃▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-mean()-Z numeric 0 180 180 -0.11 0.0096 -0.15 -0.11 -0.11 -0.1 -0.075 ▁▁▁▂▇▃▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-std()-X numeric 0 180 180 -0.56 0.45 -1 -0.98 -0.75 -0.2 0.63 ▇▁▁▃▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-std()-Y numeric 0 180 180 -0.46 0.5 -0.99 -0.94 -0.51 -0.031 0.62 ▇▁▁▁▃▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAcc-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAcc-std()-Z numeric 0 180 180 -0.58 0.4 -0.99 -0.95 -0.65 -0.23 0.61 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-mean()-X numeric 0 180 180 0.7 0.49 -0.68 0.84 0.92 0.94 0.97 ▁▁▁▁▁▁▁▇
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-mean()-Y numeric 0 180 180 -0.016 0.35 -0.48 -0.23 -0.13 0.088 0.96 ▂▇▅▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-mean()-Z numeric 0 180 180 0.074 0.29 -0.5 -0.12 0.024 0.15 0.96 ▁▅▇▆▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-std()-X numeric 0 180 180 -0.96 0.025 -1 -0.98 -0.97 -0.95 -0.83 ▇▆▅▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-std()-Y numeric 0 180 180 -0.95 0.033 -0.99 -0.97 -0.96 -0.94 -0.64 ▇▅▁▁▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAcc-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAcc-std()-Z numeric 0 180 180 -0.94 0.04 -0.99 -0.96 -0.95 -0.92 -0.61 ▇▆▂▁▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-mean()-X numeric 0 180 180 0.079 0.013 0.043 0.074 0.076 0.083 0.13 ▁▁▇▇▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-mean()-Y numeric 0 180 180 0.0076 0.014 -0.039 0.00047 0.0095 0.013 0.057 ▁▁▂▆▇▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-mean()-Z numeric 0 180 180 -0.005 0.013 -0.067 -0.011 -0.0039 0.002 0.038 ▁▁▁▁▇▆▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-std()-X numeric 0 180 180 -0.59 0.42 -0.99 -0.98 -0.81 -0.22 0.54 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-std()-Y numeric 0 180 180 -0.57 0.43 -0.99 -0.97 -0.78 -0.15 0.36 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerk-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerk-std()-Z numeric 0 180 180 -0.74 0.28 -0.99 -0.98 -0.88 -0.51 0.031 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-mean()-X numeric 0 180 180 -0.032 0.054 -0.21 -0.047 -0.029 -0.017 0.19 ▁▁▂▇▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-mean()-Y numeric 0 180 180 -0.074 0.036 -0.2 -0.09 -0.073 -0.061 0.027 ▁▁▁▃▇▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-mean()-Z numeric 0 180 180 0.087 0.036 -0.072 0.075 0.085 0.1 0.18 ▁▁▁▁▇▇▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-std()-X numeric 0 180 180 -0.69 0.29 -0.99 -0.97 -0.79 -0.44 0.27 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-std()-Y numeric 0 180 180 -0.65 0.35 -0.99 -0.96 -0.8 -0.42 0.48 ▇▁▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyro-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyro-std()-Z numeric 0 180 180 -0.62 0.37 -0.99 -0.96 -0.8 -0.31 0.56 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-mean()-X numeric 0 180 180 -0.096 0.023 -0.16 -0.1 -0.099 -0.091 -0.022 ▁▁▁▇▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-mean()-Y numeric 0 180 180 -0.043 0.0095 -0.077 -0.046 -0.041 -0.038 -0.013 ▁▁▁▂▇▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-mean()-Z numeric 0 180 180 -0.055 0.012 -0.092 -0.062 -0.053 -0.049 -0.0069 ▁▁▃▇▃▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-std()-X numeric 0 180 180 -0.7 0.3 -1 -0.98 -0.84 -0.46 0.18 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-std()-Y numeric 0 180 180 -0.76 0.27 -1 -0.98 -0.89 -0.59 0.3 ▇▂▂▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerk-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerk-std()-Z numeric 0 180 180 -0.71 0.3 -1 -0.98 -0.86 -0.47 0.19 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccMag-mean() numeric 0 180 180 -0.5 0.47 -0.99 -0.96 -0.48 -0.092 0.64 ▇▁▁▂▃▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccMag-std() numeric 0 180 180 -0.54 0.43 -0.99 -0.94 -0.61 -0.21 0.43 ▇▁▁▂▂▁▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAccMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAccMag-mean() numeric 0 180 180 -0.5 0.47 -0.99 -0.96 -0.48 -0.092 0.64 ▇▁▁▂▃▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tGravityAccMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tGravityAccMag-std() numeric 0 180 180 -0.54 0.43 -0.99 -0.94 -0.61 -0.21 0.43 ▇▁▁▂▂▁▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerkMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerkMag-mean() numeric 0 180 180 -0.61 0.4 -0.99 -0.98 -0.82 -0.25 0.43 ▇▁▁▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyAccJerkMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyAccJerkMag-std() numeric 0 180 180 -0.58 0.42 -0.99 -0.98 -0.8 -0.22 0.45 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroMag-mean() numeric 0 180 180 -0.57 0.4 -0.98 -0.95 -0.66 -0.22 0.42 ▇▁▁▂▃▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroMag-std() numeric 0 180 180 -0.63 0.34 -0.98 -0.95 -0.74 -0.36 0.3 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerkMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerkMag-mean() numeric 0 180 180 -0.74 0.28 -1 -0.99 -0.86 -0.51 0.088 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

tBodyGyroJerkMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
tBodyGyroJerkMag-std() numeric 0 180 180 -0.76 0.27 -1 -0.98 -0.88 -0.58 0.25 ▇▂▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-mean()-X numeric 0 180 180 -0.58 0.43 -1 -0.98 -0.77 -0.22 0.54 ▇▁▁▃▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-mean()-Y numeric 0 180 180 -0.49 0.48 -0.99 -0.95 -0.59 -0.063 0.52 ▇▁▁▁▃▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-mean()-Z numeric 0 180 180 -0.63 0.36 -0.99 -0.96 -0.72 -0.32 0.28 ▇▁▁▂▃▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-std()-X numeric 0 180 180 -0.55 0.46 -1 -0.98 -0.75 -0.2 0.66 ▇▁▁▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-std()-Y numeric 0 180 180 -0.48 0.47 -0.99 -0.94 -0.51 -0.079 0.56 ▇▁▁▁▃▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-std()-Z numeric 0 180 180 -0.58 0.39 -0.99 -0.95 -0.64 -0.27 0.69 ▇▁▂▃▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-meanFreq()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-meanFreq()-X numeric 0 180 180 -0.23 0.19 -0.64 -0.39 -0.26 -0.061 0.16 ▁▅▇▆▆▅▆▃
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-meanFreq()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-meanFreq()-Y numeric 0 180 180 0.012 0.14 -0.38 -0.081 0.0079 0.086 0.47 ▁▂▅▇▅▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAcc-meanFreq()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAcc-meanFreq()-Z numeric 0 180 180 0.044 0.19 -0.52 -0.036 0.066 0.18 0.4 ▁▁▂▃▇▇▆▂
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-mean()-X numeric 0 180 180 -0.61 0.4 -0.99 -0.98 -0.81 -0.28 0.47 ▇▁▁▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-mean()-Y numeric 0 180 180 -0.59 0.41 -0.99 -0.97 -0.78 -0.2 0.28 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-mean()-Z numeric 0 180 180 -0.71 0.3 -0.99 -0.98 -0.87 -0.47 0.16 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-std()-X numeric 0 180 180 -0.61 0.4 -1 -0.98 -0.83 -0.25 0.48 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-std()-Y numeric 0 180 180 -0.57 0.43 -0.99 -0.97 -0.79 -0.17 0.35 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-std()-Z numeric 0 180 180 -0.76 0.26 -0.99 -0.98 -0.9 -0.54 -0.0062 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-meanFreq()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-meanFreq()-X numeric 0 180 180 -0.069 0.25 -0.58 -0.29 -0.061 0.18 0.33 ▁▅▇▃▂▅▇▅
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-meanFreq()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-meanFreq()-Y numeric 0 180 180 -0.23 0.2 -0.6 -0.4 -0.23 -0.047 0.2 ▃▇▇▆▅▇▆▂
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccJerk-meanFreq()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccJerk-meanFreq()-Z numeric 0 180 180 -0.14 0.21 -0.63 -0.31 -0.092 0.039 0.23 ▁▂▃▃▃▆▇▂
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-mean()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-mean()-X numeric 0 180 180 -0.64 0.35 -0.99 -0.97 -0.73 -0.34 0.47 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-mean()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-mean()-Y numeric 0 180 180 -0.68 0.33 -0.99 -0.97 -0.81 -0.45 0.33 ▇▁▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-mean()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-mean()-Z numeric 0 180 180 -0.6 0.38 -0.99 -0.96 -0.79 -0.26 0.49 ▇▁▁▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-std()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-std()-X numeric 0 180 180 -0.71 0.27 -0.99 -0.98 -0.81 -0.48 0.2 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-std()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-std()-Y numeric 0 180 180 -0.65 0.36 -0.99 -0.96 -0.8 -0.42 0.65 ▇▁▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-std()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-std()-Z numeric 0 180 180 -0.66 0.34 -0.99 -0.96 -0.82 -0.39 0.52 ▇▁▃▃▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-meanFreq()-X

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-meanFreq()-X numeric 0 180 180 -0.1 0.15 -0.4 -0.21 -0.12 0.0027 0.25 ▂▆▇▇▆▃▅▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-meanFreq()-Y

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-meanFreq()-Y numeric 0 180 180 -0.17 0.18 -0.67 -0.29 -0.16 -0.043 0.27 ▁▂▃▅▇▅▃▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyGyro-meanFreq()-Z

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyGyro-meanFreq()-Z numeric 0 180 180 -0.057 0.17 -0.51 -0.15 -0.051 0.042 0.38 ▁▁▃▆▇▃▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccMag-mean() numeric 0 180 180 -0.54 0.45 -0.99 -0.96 -0.67 -0.16 0.59 ▇▁▁▃▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccMag-std() numeric 0 180 180 -0.62 0.35 -0.99 -0.95 -0.65 -0.37 0.18 ▇▁▁▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyAccMag-meanFreq()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyAccMag-meanFreq() numeric 0 180 180 0.076 0.14 -0.31 -0.015 0.081 0.17 0.44 ▁▂▅▇▇▆▃▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyAccJerkMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyAccJerkMag-mean() numeric 0 180 180 -0.58 0.43 -0.99 -0.98 -0.79 -0.19 0.54 ▇▁▁▂▂▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyAccJerkMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyAccJerkMag-std() numeric 0 180 180 -0.6 0.41 -0.99 -0.98 -0.81 -0.27 0.32 ▇▁▁▂▁▂▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyAccJerkMag-meanFreq()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyAccJerkMag-meanFreq() numeric 0 180 180 0.16 0.14 -0.13 0.045 0.17 0.28 0.49 ▂▇▇▇▇▇▅▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroMag-mean() numeric 0 180 180 -0.67 0.32 -0.99 -0.96 -0.77 -0.41 0.2 ▇▁▂▂▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroMag-std() numeric 0 180 180 -0.67 0.29 -0.98 -0.95 -0.77 -0.43 0.24 ▇▁▂▃▂▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroMag-meanFreq()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroMag-meanFreq() numeric 0 180 180 -0.036 0.18 -0.46 -0.17 -0.054 0.082 0.41 ▁▃▇▇▆▅▃▂
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroJerkMag-mean()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroJerkMag-mean() numeric 0 180 180 -0.76 0.26 -1 -0.98 -0.88 -0.58 0.15 ▇▂▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroJerkMag-std()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroJerkMag-std() numeric 0 180 180 -0.77 0.25 -1 -0.98 -0.89 -0.61 0.29 ▇▂▃▂▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

fBodyBodyGyroJerkMag-meanFreq()

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
fBodyBodyGyroJerkMag-meanFreq() numeric 0 180 180 0.13 0.11 -0.18 0.054 0.11 0.21 0.43 ▁▁▃▇▅▆▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(tBodyAccMean,gravity)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(tBodyAccMean,gravity) numeric 0 180 180 0.0066 0.04 -0.16 -0.011 0.0079 0.024 0.13 ▁▁▁▂▇▃▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(tBodyAccJerkMean),gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(tBodyAccJerkMean),gravityMean) numeric 0 180 180 0.00064 0.043 -0.12 -0.021 0.0031 0.022 0.2 ▁▂▆▇▁▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(tBodyGyroMean,gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(tBodyGyroMean,gravityMean) numeric 0 180 180 0.022 0.14 -0.39 -0.02 0.021 0.065 0.44 ▁▁▁▇▇▁▁▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(tBodyGyroJerkMean,gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(tBodyGyroJerkMean,gravityMean) numeric 0 180 180 -0.011 0.073 -0.22 -0.056 -0.016 0.032 0.18 ▁▁▃▇▆▅▂▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(X,gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(X,gravityMean) numeric 0 180 180 -0.52 0.48 -0.95 -0.79 -0.74 -0.58 0.74 ▇▅▁▁▁▁▁▂
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(Y,gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(Y,gravityMean) numeric 0 180 180 0.079 0.28 -0.87 0.022 0.17 0.24 0.42 ▁▁▁▁▁▂▇▃
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}

angle(Z,gravityMean)

Distribution

show_missing_values <- FALSE
if (has_labels(item)) {
  missing_values <- item[is.na(haven::zap_missing(item))]
  attributes(missing_values) <- attributes(item)
  if (!is.null(attributes(item)$labels)) {
    attributes(missing_values)$labels <- attributes(missing_values)$labels[is.na(attributes(missing_values)$labels)]
    attributes(item)$labels <- attributes(item)$labels[!is.na(attributes(item)$labels)]
  }
  if (is.double(item)) {
    show_missing_values <- length(unique(haven::na_tag(missing_values))) > 1
    item <- haven::zap_missing(item)
  }
  if (length(item_attributes$labels) == 0 && is.numeric(item)) {
    item <- haven::zap_labels(item)
  }
}
item_nomiss <- item[!is.na(item)]

# unnest mc_multiple and so on
if (
  is.character(item_nomiss) &&
  any(stringr::str_detect(item_nomiss, stringr::fixed(", "))) &&
  !is.null(item_info) &&
  (exists("type", item_info) && 
    any(stringr::str_detect(item_info$type, 
                            pattern = stringr::fixed("multiple"))))
  ) {
  item_nomiss <- unlist(stringr::str_split(item_nomiss, pattern = stringr::fixed(", ")))
}
attributes(item_nomiss) <- attributes(item)

old_height <- knitr::opts_chunk$get("fig.height")
non_missing_choices <- item_attributes[["labels"]]
many_labels <- length(non_missing_choices) > 7
go_vertical <- !is_numeric_or_time_var(item_nomiss) || many_labels
  
if ( go_vertical ) {
  # numeric items are plotted horizontally (because that's what usually expected)
  # categorical items are plotted vertically because we can use the screen real estate better this way

    if (is.null(choices) || 
        dplyr::n_distinct(item_nomiss) > length(non_missing_choices)) {
        non_missing_choices <- unique(item_nomiss)
        names(non_missing_choices) <- non_missing_choices
    }
  choice_multiplier <- old_height/6.5
    new_height <- 2 + choice_multiplier * length(non_missing_choices)
    new_height <- ifelse(new_height > 20, 20, new_height)
    new_height <- ifelse(new_height < 1, 1, new_height)
    if(could_disclose_unique_values(item_nomiss) && is.character(item_nomiss)) {
      new_height <- old_height
    }
    knitr::opts_chunk$set(fig.height = new_height)
}

wrap_at <- knitr::opts_chunk$get("fig.width") * 10
# todo: if there are free-text choices mingled in with the pre-defined ones, don't show
# todo: show rare items if they are pre-defined
# todo: bin rare responses into "other category"
if (!length(item_nomiss)) {
  cat("No non-missing values to show.")
} else if (!could_disclose_unique_values(item_nomiss)) {
  plot_labelled(item_nomiss, item_name, wrap_at, go_vertical)
} else {
  if (is.character(item_nomiss)) {
      char_count <- stringr::str_count(item_nomiss)
      attributes(char_count)$label <- item_label
      plot_labelled(char_count, 
                    item_name, wrap_at, FALSE, trans = "log1p", "characters")
  } else {
      cat(dplyr::n_distinct(item_nomiss), " unique, categorical values, so not shown.")
  }
}

knitr::opts_chunk$set(fig.height = old_height)

0 missing values.

Summary statistics

attributes(item) <- item_attributes
df = data.frame(item, stringsAsFactors = FALSE)
names(df) = html_item_name
escaped_table(codebook_table(df))
name data_type missing complete n mean sd p0 p25 p50 p75 p100 hist
angle(Z,gravityMean) numeric 0 180 180 -0.04 0.23 -0.87 -0.084 0.0051 0.11 0.39 ▁▁▁▁▂▇▅▁
if (show_missing_values) {
  plot_labelled(missing_values, item_name, wrap_at)
}
if (!is.null(item_info)) {
  # don't show choices again, if they're basically same thing as value labels
  if (!is.null(choices) && !is.null(item_info$choices) && 
    all(names(na.omit(choices)) == item_info$choices) &&
    all(na.omit(choices) == names(item_info$choices))) {
    item_info$choices <- NULL
  }
  item_info$label_parsed <- 
    item_info$choice_list <- item_info$study_id <- item_info$id <- NULL
  pander::pander(item_info)
}
if (!is.null(choices) && length(choices) && length(choices) < 30) {
    pander::pander(as.list(choices))
}
missingness_report

Missingness report

if (length(md_pattern)) {
  if (knitr::is_html_output()) {
    rmarkdown::paged_table(md_pattern, options = list(rows.print = 10))
  } else {
    knitr::kable(md_pattern)
  }
}
items

Codebook table

export_table(metadata_table)
jsonld

JSON-LD metadata The following JSON-LD can be found by search engines, if you share this codebook publicly on the web.

{
  "name": "codebook_data",
  "datePublished": "2020-05-31",
  "description": "The dataset has N=180 rows and 88 columns.\n180 rows have no missing values on any column.\n\n\n## Table of variables\nThis table contains variable names, labels, their central tendencies and other attributes.\n\n|name                                 |data_type |missing |complete |n   |empty |n_unique |min |max |mean    |sd     |p0     |p25     |p50     |p75    |p100    |hist     |\n|:------------------------------------|:---------|:-------|:--------|:---|:-----|:--------|:---|:---|:-------|:------|:------|:-------|:-------|:------|:-------|:--------|\n|subject_id                           |integer   |0       |180      |180 |NA    |NA       |NA  |NA  |15.5    |8.68   |1      |8       |15.5    |23     |30      |▇▇▆▇▇▆▇▇ |\n|activity                             |character |0       |180      |180 |0     |6        |6   |18  |NA      |NA     |NA     |NA      |NA      |NA     |NA      |NA       |\n|tBodyAcc-mean()-X                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.27    |0.012  |0.22   |0.27    |0.28    |0.28   |0.3     |▁▁▁▁▂▇▂▁ |\n|tBodyAcc-mean()-Y                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.018  |0.0058 |-0.041 |-0.02   |-0.017  |-0.015 |-0.0013 |▁▁▂▂▇▃▁▁ |\n|tBodyAcc-mean()-Z                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.11   |0.0096 |-0.15  |-0.11   |-0.11   |-0.1   |-0.075  |▁▁▁▂▇▃▁▁ |\n|tBodyAcc-std()-X                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.56   |0.45   |-1     |-0.98   |-0.75   |-0.2   |0.63    |▇▁▁▃▂▂▁▁ |\n|tBodyAcc-std()-Y                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.46   |0.5    |-0.99  |-0.94   |-0.51   |-0.031 |0.62    |▇▁▁▁▃▂▁▁ |\n|tBodyAcc-std()-Z                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.58   |0.4    |-0.99  |-0.95   |-0.65   |-0.23  |0.61    |▇▁▂▃▂▁▁▁ |\n|tGravityAcc-mean()-X                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.7     |0.49   |-0.68  |0.84    |0.92    |0.94   |0.97    |▁▁▁▁▁▁▁▇ |\n|tGravityAcc-mean()-Y                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.016  |0.35   |-0.48  |-0.23   |-0.13   |0.088  |0.96    |▂▇▅▂▁▁▁▁ |\n|tGravityAcc-mean()-Z                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.074   |0.29   |-0.5   |-0.12   |0.024   |0.15   |0.96    |▁▅▇▆▁▁▁▁ |\n|tGravityAcc-std()-X                  |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.96   |0.025  |-1     |-0.98   |-0.97   |-0.95  |-0.83   |▇▆▅▂▁▁▁▁ |\n|tGravityAcc-std()-Y                  |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.95   |0.033  |-0.99  |-0.97   |-0.96   |-0.94  |-0.64   |▇▅▁▁▁▁▁▁ |\n|tGravityAcc-std()-Z                  |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.94   |0.04   |-0.99  |-0.96   |-0.95   |-0.92  |-0.61   |▇▆▂▁▁▁▁▁ |\n|tBodyAccJerk-mean()-X                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.079   |0.013  |0.043  |0.074   |0.076   |0.083  |0.13    |▁▁▇▇▂▁▁▁ |\n|tBodyAccJerk-mean()-Y                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.0076  |0.014  |-0.039 |0.00047 |0.0095  |0.013  |0.057   |▁▁▂▆▇▂▁▁ |\n|tBodyAccJerk-mean()-Z                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.005  |0.013  |-0.067 |-0.011  |-0.0039 |0.002  |0.038   |▁▁▁▁▇▆▁▁ |\n|tBodyAccJerk-std()-X                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.59   |0.42   |-0.99  |-0.98   |-0.81   |-0.22  |0.54    |▇▁▁▂▂▂▁▁ |\n|tBodyAccJerk-std()-Y                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.57   |0.43   |-0.99  |-0.97   |-0.78   |-0.15  |0.36    |▇▁▁▂▂▂▁▁ |\n|tBodyAccJerk-std()-Z                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.74   |0.28   |-0.99  |-0.98   |-0.88   |-0.51  |0.031   |▇▁▂▂▂▁▁▁ |\n|tBodyGyro-mean()-X                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.032  |0.054  |-0.21  |-0.047  |-0.029  |-0.017 |0.19    |▁▁▂▇▁▁▁▁ |\n|tBodyGyro-mean()-Y                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.074  |0.036  |-0.2   |-0.09   |-0.073  |-0.061 |0.027   |▁▁▁▃▇▂▁▁ |\n|tBodyGyro-mean()-Z                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.087   |0.036  |-0.072 |0.075   |0.085   |0.1    |0.18    |▁▁▁▁▇▇▂▁ |\n|tBodyGyro-std()-X                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.69   |0.29   |-0.99  |-0.97   |-0.79   |-0.44  |0.27    |▇▁▂▃▂▁▁▁ |\n|tBodyGyro-std()-Y                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.65   |0.35   |-0.99  |-0.96   |-0.8    |-0.42  |0.48    |▇▁▃▂▁▁▁▁ |\n|tBodyGyro-std()-Z                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.62   |0.37   |-0.99  |-0.96   |-0.8    |-0.31  |0.56    |▇▁▂▃▂▁▁▁ |\n|tBodyGyroJerk-mean()-X               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.096  |0.023  |-0.16  |-0.1    |-0.099  |-0.091 |-0.022  |▁▁▁▇▁▁▁▁ |\n|tBodyGyroJerk-mean()-Y               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.043  |0.0095 |-0.077 |-0.046  |-0.041  |-0.038 |-0.013  |▁▁▁▂▇▂▁▁ |\n|tBodyGyroJerk-mean()-Z               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.055  |0.012  |-0.092 |-0.062  |-0.053  |-0.049 |-0.0069 |▁▁▃▇▃▁▁▁ |\n|tBodyGyroJerk-std()-X                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.7    |0.3    |-1     |-0.98   |-0.84   |-0.46  |0.18    |▇▁▂▃▂▁▁▁ |\n|tBodyGyroJerk-std()-Y                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.76   |0.27   |-1     |-0.98   |-0.89   |-0.59  |0.3     |▇▂▂▂▁▁▁▁ |\n|tBodyGyroJerk-std()-Z                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.71   |0.3    |-1     |-0.98   |-0.86   |-0.47  |0.19    |▇▁▂▂▂▁▁▁ |\n|tBodyAccMag-mean()                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.5    |0.47   |-0.99  |-0.96   |-0.48   |-0.092 |0.64    |▇▁▁▂▃▂▁▁ |\n|tBodyAccMag-std()                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.54   |0.43   |-0.99  |-0.94   |-0.61   |-0.21  |0.43    |▇▁▁▂▂▁▂▁ |\n|tGravityAccMag-mean()                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.5    |0.47   |-0.99  |-0.96   |-0.48   |-0.092 |0.64    |▇▁▁▂▃▂▁▁ |\n|tGravityAccMag-std()                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.54   |0.43   |-0.99  |-0.94   |-0.61   |-0.21  |0.43    |▇▁▁▂▂▁▂▁ |\n|tBodyAccJerkMag-mean()               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.61   |0.4    |-0.99  |-0.98   |-0.82   |-0.25  |0.43    |▇▁▁▂▂▁▁▁ |\n|tBodyAccJerkMag-std()                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.58   |0.42   |-0.99  |-0.98   |-0.8    |-0.22  |0.45    |▇▁▁▂▂▂▁▁ |\n|tBodyGyroMag-mean()                  |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.57   |0.4    |-0.98  |-0.95   |-0.66   |-0.22  |0.42    |▇▁▁▂▃▁▁▁ |\n|tBodyGyroMag-std()                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.63   |0.34   |-0.98  |-0.95   |-0.74   |-0.36  |0.3     |▇▁▂▃▂▁▁▁ |\n|tBodyGyroJerkMag-mean()              |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.74   |0.28   |-1     |-0.99   |-0.86   |-0.51  |0.088   |▇▁▂▂▂▁▁▁ |\n|tBodyGyroJerkMag-std()               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.76   |0.27   |-1     |-0.98   |-0.88   |-0.58  |0.25    |▇▂▃▂▁▁▁▁ |\n|fBodyAcc-mean()-X                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.58   |0.43   |-1     |-0.98   |-0.77   |-0.22  |0.54    |▇▁▁▃▂▂▁▁ |\n|fBodyAcc-mean()-Y                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.49   |0.48   |-0.99  |-0.95   |-0.59   |-0.063 |0.52    |▇▁▁▁▃▂▁▁ |\n|fBodyAcc-mean()-Z                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.63   |0.36   |-0.99  |-0.96   |-0.72   |-0.32  |0.28    |▇▁▁▂▃▁▁▁ |\n|fBodyAcc-std()-X                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.55   |0.46   |-1     |-0.98   |-0.75   |-0.2   |0.66    |▇▁▁▃▂▁▁▁ |\n|fBodyAcc-std()-Y                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.48   |0.47   |-0.99  |-0.94   |-0.51   |-0.079 |0.56    |▇▁▁▁▃▂▁▁ |\n|fBodyAcc-std()-Z                     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.58   |0.39   |-0.99  |-0.95   |-0.64   |-0.27  |0.69    |▇▁▂▃▁▁▁▁ |\n|fBodyAcc-meanFreq()-X                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.23   |0.19   |-0.64  |-0.39   |-0.26   |-0.061 |0.16    |▁▅▇▆▆▅▆▃ |\n|fBodyAcc-meanFreq()-Y                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.012   |0.14   |-0.38  |-0.081  |0.0079  |0.086  |0.47    |▁▂▅▇▅▂▁▁ |\n|fBodyAcc-meanFreq()-Z                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.044   |0.19   |-0.52  |-0.036  |0.066   |0.18   |0.4     |▁▁▂▃▇▇▆▂ |\n|fBodyAccJerk-mean()-X                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.61   |0.4    |-0.99  |-0.98   |-0.81   |-0.28  |0.47    |▇▁▁▂▂▁▁▁ |\n|fBodyAccJerk-mean()-Y                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.59   |0.41   |-0.99  |-0.97   |-0.78   |-0.2   |0.28    |▇▁▁▂▂▂▁▁ |\n|fBodyAccJerk-mean()-Z                |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.71   |0.3    |-0.99  |-0.98   |-0.87   |-0.47  |0.16    |▇▁▂▂▂▁▁▁ |\n|fBodyAccJerk-std()-X                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.61   |0.4    |-1     |-0.98   |-0.83   |-0.25  |0.48    |▇▁▁▂▂▂▁▁ |\n|fBodyAccJerk-std()-Y                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.57   |0.43   |-0.99  |-0.97   |-0.79   |-0.17  |0.35    |▇▁▁▂▂▂▁▁ |\n|fBodyAccJerk-std()-Z                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.76   |0.26   |-0.99  |-0.98   |-0.9    |-0.54  |-0.0062 |▇▁▂▂▂▁▁▁ |\n|fBodyAccJerk-meanFreq()-X            |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.069  |0.25   |-0.58  |-0.29   |-0.061  |0.18   |0.33    |▁▅▇▃▂▅▇▅ |\n|fBodyAccJerk-meanFreq()-Y            |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.23   |0.2    |-0.6   |-0.4    |-0.23   |-0.047 |0.2     |▃▇▇▆▅▇▆▂ |\n|fBodyAccJerk-meanFreq()-Z            |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.14   |0.21   |-0.63  |-0.31   |-0.092  |0.039  |0.23    |▁▂▃▃▃▆▇▂ |\n|fBodyGyro-mean()-X                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.64   |0.35   |-0.99  |-0.97   |-0.73   |-0.34  |0.47    |▇▁▂▃▂▁▁▁ |\n|fBodyGyro-mean()-Y                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.68   |0.33   |-0.99  |-0.97   |-0.81   |-0.45  |0.33    |▇▁▃▂▁▁▁▁ |\n|fBodyGyro-mean()-Z                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.6    |0.38   |-0.99  |-0.96   |-0.79   |-0.26  |0.49    |▇▁▁▃▂▁▁▁ |\n|fBodyGyro-std()-X                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.71   |0.27   |-0.99  |-0.98   |-0.81   |-0.48  |0.2     |▇▁▂▃▂▁▁▁ |\n|fBodyGyro-std()-Y                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.65   |0.36   |-0.99  |-0.96   |-0.8    |-0.42  |0.65    |▇▁▃▂▁▁▁▁ |\n|fBodyGyro-std()-Z                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.66   |0.34   |-0.99  |-0.96   |-0.82   |-0.39  |0.52    |▇▁▃▃▁▁▁▁ |\n|fBodyGyro-meanFreq()-X               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.1    |0.15   |-0.4   |-0.21   |-0.12   |0.0027 |0.25    |▂▆▇▇▆▃▅▁ |\n|fBodyGyro-meanFreq()-Y               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.17   |0.18   |-0.67  |-0.29   |-0.16   |-0.043 |0.27    |▁▂▃▅▇▅▃▁ |\n|fBodyGyro-meanFreq()-Z               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.057  |0.17   |-0.51  |-0.15   |-0.051  |0.042  |0.38    |▁▁▃▆▇▃▂▁ |\n|fBodyAccMag-mean()                   |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.54   |0.45   |-0.99  |-0.96   |-0.67   |-0.16  |0.59    |▇▁▁▃▂▂▁▁ |\n|fBodyAccMag-std()                    |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.62   |0.35   |-0.99  |-0.95   |-0.65   |-0.37  |0.18    |▇▁▁▂▂▁▁▁ |\n|fBodyAccMag-meanFreq()               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.076   |0.14   |-0.31  |-0.015  |0.081   |0.17   |0.44    |▁▂▅▇▇▆▃▁ |\n|fBodyBodyAccJerkMag-mean()           |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.58   |0.43   |-0.99  |-0.98   |-0.79   |-0.19  |0.54    |▇▁▁▂▂▂▁▁ |\n|fBodyBodyAccJerkMag-std()            |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.6    |0.41   |-0.99  |-0.98   |-0.81   |-0.27  |0.32    |▇▁▁▂▁▂▁▁ |\n|fBodyBodyAccJerkMag-meanFreq()       |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.16    |0.14   |-0.13  |0.045   |0.17    |0.28   |0.49    |▂▇▇▇▇▇▅▁ |\n|fBodyBodyGyroMag-mean()              |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.67   |0.32   |-0.99  |-0.96   |-0.77   |-0.41  |0.2     |▇▁▂▂▂▁▁▁ |\n|fBodyBodyGyroMag-std()               |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.67   |0.29   |-0.98  |-0.95   |-0.77   |-0.43  |0.24    |▇▁▂▃▂▁▁▁ |\n|fBodyBodyGyroMag-meanFreq()          |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.036  |0.18   |-0.46  |-0.17   |-0.054  |0.082  |0.41    |▁▃▇▇▆▅▃▂ |\n|fBodyBodyGyroJerkMag-mean()          |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.76   |0.26   |-1     |-0.98   |-0.88   |-0.58  |0.15    |▇▂▃▂▁▁▁▁ |\n|fBodyBodyGyroJerkMag-std()           |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.77   |0.25   |-1     |-0.98   |-0.89   |-0.61  |0.29    |▇▂▃▂▁▁▁▁ |\n|fBodyBodyGyroJerkMag-meanFreq()      |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.13    |0.11   |-0.18  |0.054   |0.11    |0.21   |0.43    |▁▁▃▇▅▆▂▁ |\n|angle(tBodyAccMean,gravity)          |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.0066  |0.04   |-0.16  |-0.011  |0.0079  |0.024  |0.13    |▁▁▁▂▇▃▁▁ |\n|angle(tBodyAccJerkMean),gravityMean) |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.00064 |0.043  |-0.12  |-0.021  |0.0031  |0.022  |0.2     |▁▂▆▇▁▁▁▁ |\n|angle(tBodyGyroMean,gravityMean)     |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.022   |0.14   |-0.39  |-0.02   |0.021   |0.065  |0.44    |▁▁▁▇▇▁▁▁ |\n|angle(tBodyGyroJerkMean,gravityMean) |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.011  |0.073  |-0.22  |-0.056  |-0.016  |0.032  |0.18    |▁▁▃▇▆▅▂▁ |\n|angle(X,gravityMean)                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.52   |0.48   |-0.95  |-0.79   |-0.74   |-0.58  |0.74    |▇▅▁▁▁▁▁▂ |\n|angle(Y,gravityMean)                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |0.079   |0.28   |-0.87  |0.022   |0.17    |0.24   |0.42    |▁▁▁▁▁▂▇▃ |\n|angle(Z,gravityMean)                 |numeric   |0       |180      |180 |NA    |NA       |NA  |NA  |-0.04   |0.23   |-0.87  |-0.084  |0.0051  |0.11   |0.39    |▁▁▁▁▂▇▅▁ |\n\n### Note\nThis dataset was automatically described using the [codebook R package](https://rubenarslan.github.io/codebook/) (version 0.8.1).",
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}`